MitoSatPlant: Mitochondrial Microsatellites Database of Viridiplantae
 
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       Organism: Aegilops speltoides (NC_022666 476091 bp)                                                                                                     Show Primer       Download
Compound : 1     Perfect Compound : 1   Overlapping Compound : 0
Perfect      : 80     Density of SSR      : 1SSR/ 5.81 kb   Average length of SSR  : 13.45 bp
Coding      : 5     Non-Coding           : 76   Coding and Non-Coding : 0
REPEATMONODITRITETRAPENTAHEXATOTAL
PERFECT 3 10 15 38 9 5 80
IMPERFECT 0 62 210 213 44 29 558
Perfect SSRs
S. No.MOTIFLENGTHSTARTENDREGION
1. (GTATG)3153853938553Non coding
2. (TTCTA)315129615129629Non coding
3. (TCAAT)315193226193240Non coding
4. (GTTCA)315199854199868Non coding
5. (AGAAT)420214101214120Non coding
6. (CATAA)315215531215545Coding
7. (TTCAT)315304828304842Non coding
8. (TGGAT)315326583326597Non coding
9. (TGGAT)315443688443702Non coding
Kumar M, Kapil A, Shanker A (2014). Mitochondrion, http:// dx.doi.org/10.1016/j.mito.2014.02.002                                                                                         Site best viewed at 1280x768.