MitoSatPlant: Mitochondrial Microsatellites Database of Viridiplantae
 
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       Organism: Aegilops speltoides (NC_022666 476091 bp)                                                                                                     Show Primer       Download
Compound : 1     Perfect Compound : 1   Overlapping Compound : 0
Perfect      : 80     Density of SSR      : 1SSR/ 5.81 kb   Average length of SSR  : 13.45 bp
Coding      : 5     Non-Coding           : 76   Coding and Non-Coding : 0
REPEATMONODITRITETRAPENTAHEXATOTAL
PERFECT 3 10 15 38 9 5 80
IMPERFECT 0 62 210 213 44 29 558
Perfect SSRs
S. No.MOTIFLENGTHSTARTENDREGION
1. (TTC)4126975369764Non coding
2. (CTC)4127281772828Non coding
3. (GCT)5158899489008Non coding
4. (ACT)412132581132592Non coding
5. (CTT)412159707159718Non coding
6. (AGA)412180943180954Non coding
7. (CTA)412184827184838Non coding
8. (AAG)412205590205601Non coding
9. (AAT)515231233231247Non coding
10. (ATA)412238719238730Non coding
11. (CAG)412270663270674Non coding
12. (GGC)412319193319204Non coding
13. (TAA)412354863354874Coding
14. (AAT)412429698429709Non coding
15. (AAG)412471647471658Non coding
Kumar M, Kapil A, Shanker A (2014). Mitochondrion, http:// dx.doi.org/10.1016/j.mito.2014.02.002                                                                                         Site best viewed at 1280x768.