MitoSatPlant: Mitochondrial Microsatellites Database of Viridiplantae
 
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       Organism: Ajuga reptans (NC_023103 352069 bp)                                                                                                     Show Primer       Download
Compound : 0     Perfect Compound : 0   Overlapping Compound : 0
Perfect      : 60     Density of SSR      : 1SSR/ 5.87 kb   Average length of SSR  : 12.35 bp
Coding      : 1     Non-Coding           : 58   Coding and Non-Coding : 1
REPEATMONODITRITETRAPENTAHEXATOTAL
PERFECT 0 2 16 36 6 0 60
IMPERFECT 4 59 129 165 29 13 399
Perfect SSRs
S. No.MOTIFLENGTHSTARTENDREGION
1. (CTTTT)315917931Coding
2. (AAAAG)3157241172425Non coding
3. (CTATT)315184364184378Non coding
4. (CTTCT)315190569190583Non coding
5. (CTTTT)315208273208287Non coding
6. (ACTAG)315251084251098Coding-Non coding
Kumar M, Kapil A, Shanker A (2014). Mitochondrion, http:// dx.doi.org/10.1016/j.mito.2014.02.002                                                                                         Site best viewed at 1280x768.