MitoSatPlant: Mitochondrial Microsatellites Database of Viridiplantae
 
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       Organism: Ajuga reptans (NC_023103 352069 bp)                                                                                                     Show Primer       Download
Compound : 0     Perfect Compound : 0   Overlapping Compound : 0
Perfect      : 60     Density of SSR      : 1SSR/ 5.87 kb   Average length of SSR  : 12.35 bp
Coding      : 1     Non-Coding           : 58   Coding and Non-Coding : 1
REPEATMONODITRITETRAPENTAHEXATOTAL
PERFECT 0 2 16 36 6 0 60
IMPERFECT 4 59 129 165 29 13 399
Perfect SSRs
S. No.MOTIFLENGTHSTARTENDREGION
1. (ACT)4124841548426Non coding
2. (AAG)4125915859169Non coding
3. (CTT)412131351131362Non coding
4. (ATA)412172889172900Non coding
5. (GAA)412189898189909Non coding
6. (TCT)412200260200271Non coding
7. (TTC)412200784200795Non coding
8. (CTA)412204369204380Non coding
9. (CTA)412214207214218Non coding
10. (TCT)412228364228375Non coding
11. (AAG)412231635231646Non coding
12. (TAC)412235809235820Non coding
13. (TGC)515243989244003Non coding
14. (AGA)412244333244344Non coding
15. (CTT)412293466293477Non coding
16. (AAG)412351241351252Non coding
Kumar M, Kapil A, Shanker A (2014). Mitochondrion, http:// dx.doi.org/10.1016/j.mito.2014.02.002                                                                                         Site best viewed at 1280x768.