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Organism:
Anomodon rugelii
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(NC_016121 , 104239 bp)
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Show Primer
Download
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Compound
:
0
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Perfect Compound
:
0
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Overlapping Compound
:
0
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Perfect
:
22
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Density of SSR
:
1SSR/
4.74
kb
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Average length of SSR
:
12.86
bp
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Coding
:
3
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Non-Coding
:
18
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Coding and Non-Coding
:
1
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| REPEAT | MONO | DI | TRI | TETRA | PENTA | HEXA | TOTAL |
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PERFECT
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1
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10
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4
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7
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0
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0
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22
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Perfect SSRs
| S. No. | MOTIF | LENGTH | START | END | REGION |
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1.
| (ATAG)3 | 12 | 11306 | 11317 | Non coding |
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2.
| (TTTA)3 | 12 | 15538 | 15549 | Coding |
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3.
| (ATAA)3 | 12 | 25764 | 25775 | Non coding |
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4.
| (AATC)3 | 12 | 33722 | 33733 | Non coding |
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5.
| (ATAA)3 | 12 | 54914 | 54925 | Non coding |
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6.
| (ATTT)3 | 12 | 72049 | 72060 | Coding |
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7.
| (TAGA)3 | 12 | 91081 | 91092 | Coding-Non coding |
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Kumar M, Kapil A, Shanker A (2014). Mitochondrion, http://
dx.doi.org/10.1016/j.mito.2014.02.002
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