MitoSatPlant: Mitochondrial Microsatellites Database of Viridiplantae
 
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       Organism: Arabidopsis thaliana (NC_001284 366924 bp)                                                                                                     Show Primer       Download
Compound : 0     Perfect Compound : 0   Overlapping Compound : 0
Perfect      : 64     Density of SSR      : 1SSR/ 5.73 kb   Average length of SSR  : 12.58 bp
Coding      : 8     Non-Coding           : 55   Coding and Non-Coding : 1
REPEATMONODITRITETRAPENTAHEXATOTAL
PERFECT 4 5 10 38 7 0 64
IMPERFECT 7 33 161 168 21 8 398
Perfect SSRs
S. No.MOTIFLENGTHSTARTENDREGION
1. (CATTC)31530073021Non coding
2. (ATAAG)3155735657370Non coding
3. (GAATG)315119506119520Coding
4. (TGCTT)315121055121069Non coding
5. (ACTAG)315144293144307Coding-Non coding
6. (AGAAC)315168420168434Non coding
7. (AATTC)315248980248994Non coding
Kumar M, Kapil A, Shanker A (2014). Mitochondrion, http:// dx.doi.org/10.1016/j.mito.2014.02.002                                                                                         Site best viewed at 1280x768.