MitoSatPlant: Mitochondrial Microsatellites Database of Viridiplantae
 
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       Organism: Arabidopsis thaliana (NC_001284 366924 bp)                                                                                                     Show Primer       Download
Compound : 0     Perfect Compound : 0   Overlapping Compound : 0
Perfect      : 64     Density of SSR      : 1SSR/ 5.73 kb   Average length of SSR  : 12.58 bp
Coding      : 8     Non-Coding           : 55   Coding and Non-Coding : 1
REPEATMONODITRITETRAPENTAHEXATOTAL
PERFECT 4 5 10 38 7 0 64
IMPERFECT 7 33 161 168 21 8 398
Perfect SSRs
S. No.MOTIFLENGTHSTARTENDREGION
1. (GAA)51585078521Non coding
2. (TTC)4124277142782Non coding
3. (TTC)4126767567686Non coding
4. (TTC)412115018115029Non coding
5. (CTT)412121143121154Non coding
6. (GAA)412294698294709Non coding
7. (ATA)412311868311879Non coding
8. (GAA)412313911313922Non coding
9. (GTA)412328847328858Non coding
10. (GGC)412347171347182Coding
Kumar M, Kapil A, Shanker A (2014). Mitochondrion, http:// dx.doi.org/10.1016/j.mito.2014.02.002                                                                                         Site best viewed at 1280x768.