MitoSatPlant: Mitochondrial Microsatellites Database of Viridiplantae
 
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       Organism: Asclepias syriaca (NC_022796 682498 bp)                                                                                               Show Alignment       Show Primer       Download
     
          Density of SSR      : 1SSR/ 0.83 kb   Average length of SSR  : 12.68 bp
Coding      : 20     Non-Coding           : 798   Coding and Non-Coding : 3
REPEATMONODITRITETRAPENTAHEXATOTAL
PERFECT 1 10 26 59 11 3 110
IMPERFECT 6 90 299 322 63 41 821
Imperfect SSRs
S. No.MOTIFLENGTHSTARTENDREGION
1. CACTAT191131011328Non coding
2. TAAGTA251191511939Non coding
3. ATAAAG193400634024Non coding
4. CTCAGC193833338351Non coding
5. TCTTAT234092540947Non coding
6. TTTGTT194139541413Non coding
7. TTTTCT184159241609Non coding
8. TCAATA184408844105Non coding
9. GCCCAG176888568901Non coding
10. AGGAGT18112323112340Non coding
11. CAAAGG19131840131858Non coding
12. TTATAG18137513137530Non coding
13. TTTTCT18140318140335Non coding
14. TCTACA18142838142855Non coding
15. AGGAAA18155557155574Non coding
16. AAAGAA19186832186850Non coding
17. AATTTT19218279218297Non coding
18. CTCTTT19225388225406Non coding
19. TTCTTT19255353255371Non coding
20. CTAAAG18299449299466Non coding
21. CAGGAC24315670315693Non coding
22. TATCTA18334027334044Non coding
23. CTAGAT18342182342199Non coding
24. ATATAG19343507343525Non coding
25. TCCCAG18344155344172Non coding
26. AGAGGA19391028391046Non coding
27. TATCTA23397264397286Non coding
28. GAATGA19421366421384Non coding
29. AGTGGG18459812459829Non coding
30. AAAGTC17486982486998Non coding
31. TCTAGC18493474493491Non coding
32. AGGAGT18502155502172Non coding
33. GTAGCT18527923527940Non coding
34. GAGTCA17530566530582Non coding
35. CTTACC18532982532999Non coding
36. TTCTTT19562545562563Non coding
37. CAACTG18574398574415Non coding
38. TTTCTA18582722582739Non coding
39. ATCTTT19595176595194Non coding
40. AAGGAA18596017596034Non coding
41. TATGAG24662489662512Non coding
Kumar M, Kapil A, Shanker A (2014). Mitochondrion, http:// dx.doi.org/10.1016/j.mito.2014.02.002                                                                                         Site best viewed at 1280x768.