MitoSatPlant: Mitochondrial Microsatellites Database of Viridiplantae
 
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       Organism: Asclepias syriaca (NC_022796 682498 bp)                                                                                                     Show Primer       Download
Compound : 0     Perfect Compound : 0   Overlapping Compound : 0
Perfect      : 110     Density of SSR      : 1SSR/ 6.2 kb   Average length of SSR  : 12.8 bp
Coding      : 2     Non-Coding           : 108   Coding and Non-Coding : 0
REPEATMONODITRITETRAPENTAHEXATOTAL
PERFECT 1 10 26 59 11 3 110
IMPERFECT 6 90 299 322 63 41 821
Perfect SSRs
S. No.MOTIFLENGTHSTARTENDREGION
1. (TGC)4125769357704Non coding
2. (CTT)4129378593796Non coding
3. (TCT)412102371102382Non coding
4. (TCT)515137000137014Non coding
5. (TTG)412140367140378Non coding
6. (ATT)412145895145906Non coding
7. (CTT)515160573160587Non coding
8. (TTA)412201874201885Non coding
9. (AAG)412208037208048Non coding
10. (AAG)412215063215074Non coding
11. (AGA)412220116220127Non coding
12. (TCT)412220276220287Non coding
13. (GAA)412251492251503Non coding
14. (TTA)412265024265035Non coding
15. (ATT)412299313299324Non coding
16. (TTC)412300521300532Non coding
17. (AAT)412328268328279Non coding
18. (GAA)412347465347476Non coding
19. (AGA)412372465372476Non coding
20. (CTT)412406450406461Coding
21. (AAT)515421395421409Non coding
22. (ATA)515612197612211Non coding
23. (AAT)412635369635380Non coding
24. (AGA)412643980643991Non coding
25. (TTA)412677335677346Non coding
26. (TTA)412679980679991Non coding
Kumar M, Kapil A, Shanker A (2014). Mitochondrion, http:// dx.doi.org/10.1016/j.mito.2014.02.002                                                                                         Site best viewed at 1280x768.