MitoSatPlant: Mitochondrial Microsatellites Database of Viridiplantae
 
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       Organism: Atrichum angustatum (NC_024520 115146 bp)                                                                                                     Show Primer       Download
Compound : 1     Perfect Compound : 0   Overlapping Compound : 1
Perfect      : 37     Density of SSR      : 1SSR/ 3.03 kb   Average length of SSR  : 13.86 bp
Coding      : 7     Non-Coding           : 31   Coding and Non-Coding : 0
REPEATMONODITRITETRAPENTAHEXATOTAL
PERFECT 3 17 6 11 0 0 37
IMPERFECT 11 40 24 48 8 2 133
Perfect SSRs
S. No.MOTIFLENGTHSTARTENDREGION
1. (TA)612783794Non coding
2. (ATA)51516761690Non coding
3. (TTG)41245804591Non coding
4. (AAAT)3121018410195Non coding
5. (AT)7141306313076Non coding
6. (ATAG)3121316413175Non coding
7. (TTTA)3121747317484Coding
8. (T)12122017020181Coding
9. (AT)6122241922430Non coding
10. (CTTT)3122464424655Non coding
11. (ATAA)3122698126992Coding
12. (ATAA)3122850928520Non coding
13. (AT)6122930029311Non coding
14. (AT)6123267032681Non coding
15. (TGAA)3123417934190Coding
16. (ATT)4124413944150Non coding
17. (AAT)4124641046421Non coding
18. (AT)7145088050893Non coding
19. (G)34346329563328Non coding
20. (AT)7146343363446Non coding
21. (AT)6126695666967Non coding
22. (AT)6127120671217Non coding
23. (GAA)4127230572316Non coding
24. (AT)7147865978672Non coding
25. (AT)8167887478889Non coding
26. (ATTT)3127915679167Coding
27. (AT)7147988379896Non coding
28. (TTA)4128017280183Coding
29. (AATA)3128269582706Non coding
30. (AAAT)3128517285183Non coding
31. (G)12128686786878Non coding
32. (AT)6128694986960Non coding
33. (AT)6129599496005Non coding
34. (TCAA)312108878108889Coding
35. (TA)714109089109102Non coding
36. (AT)612109166109177Non coding
37. (AT)816115101115116Non coding
Kumar M, Kapil A, Shanker A (2014). Mitochondrion, http:// dx.doi.org/10.1016/j.mito.2014.02.002                                                                                         Site best viewed at 1280x768.