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Organism:
Batis maritima
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(NC_024429 , 403930 bp)
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Show Primer
Download
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Compound
:
0
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Perfect Compound
:
0
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Overlapping Compound
:
0
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Perfect
:
81
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Density of SSR
:
1SSR/
4.99
kb
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Average length of SSR
:
12.36
bp
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Coding
:
6
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Non-Coding
:
75
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Coding and Non-Coding
:
0
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| REPEAT | MONO | DI | TRI | TETRA | PENTA | HEXA | TOTAL |
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PERFECT
|
10
|
8
|
11
|
51
|
1
|
0
|
81
|
|
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Perfect SSRs
| S. No. | MOTIF | LENGTH | START | END | REGION |
|
1.
| (GGT)4 | 12 | 8253 | 8264 | Non coding |
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2.
| (TCT)4 | 12 | 106366 | 106377 | Non coding |
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3.
| (TGT)4 | 12 | 129207 | 129218 | Non coding |
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4.
| (GAT)4 | 12 | 139443 | 139454 | Non coding |
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5.
| (TAA)5 | 15 | 146748 | 146762 | Non coding |
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6.
| (TTG)4 | 12 | 171408 | 171419 | Non coding |
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7.
| (TAG)4 | 12 | 316743 | 316754 | Non coding |
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8.
| (TAA)4 | 12 | 351422 | 351433 | Non coding |
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9.
| (ATT)5 | 15 | 353612 | 353626 | Non coding |
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10.
| (AGA)4 | 12 | 381140 | 381151 | Non coding |
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11.
| (AAG)4 | 12 | 391441 | 391452 | Non coding |
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Kumar M, Kapil A, Shanker A (2014). Mitochondrion, http://
dx.doi.org/10.1016/j.mito.2014.02.002
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