MitoSatPlant: Mitochondrial Microsatellites Database of Viridiplantae
 
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       Organism: Batis maritima (NC_024429 403930 bp)                                                                                                     Show Primer       Download
Compound : 0     Perfect Compound : 0   Overlapping Compound : 0
Perfect      : 81     Density of SSR      : 1SSR/ 4.99 kb   Average length of SSR  : 12.36 bp
Coding      : 6     Non-Coding           : 75   Coding and Non-Coding : 0
REPEATMONODITRITETRAPENTAHEXATOTAL
PERFECT 10 8 11 51 1 0 81
IMPERFECT 15 64 149 188 38 15 469
Perfect SSRs
S. No.MOTIFLENGTHSTARTENDREGION
1. (ATTT)41693879402Non coding
2. (CGCC)3121609216103Non coding
3. (TTTA)3121662316634Non coding
4. (TCTA)3121666416675Non coding
5. (AGAT)3123603636047Non coding
6. (CAAG)3123668336694Non coding
7. (AAGA)3124000340014Non coding
8. (TAAG)3125661656627Non coding
9. (TCCC)3125685756868Non coding
10. (TGCC)3125998459995Non coding
11. (AATG)3126566465675Non coding
12. (AAGA)3126690266913Non coding
13. (CTTG)3126734467355Non coding
14. (GAAA)3127936479375Non coding
15. (GAAA)312103409103420Non coding
16. (CGCC)312110486110497Non coding
17. (AGAA)312115504115515Non coding
18. (GCAA)312129973129984Non coding
19. (CTTT)312148173148184Non coding
20. (CTTA)312153800153811Non coding
21. (TTCC)312171900171911Non coding
22. (AATG)312182526182537Coding
23. (TTAC)312192690192701Non coding
24. (TCCT)312202172202183Coding
25. (TTTA)312225059225070Non coding
26. (CCTT)312225780225791Non coding
27. (TGAA)312234058234069Non coding
28. (ATTC)312253908253919Non coding
29. (CGAT)312255358255369Non coding
30. (CTGA)312266956266967Non coding
31. (TATC)312268870268881Non coding
32. (TCTT)312269038269049Non coding
33. (TTAA)312270027270038Non coding
34. (CCTT)312312279312290Coding
35. (TTTG)312318017318028Non coding
36. (GCAG)312323086323097Non coding
37. (CTGC)312324710324721Coding
38. (CTTA)312333796333807Non coding
39. (AGAA)312349288349299Non coding
40. (TGCT)312353578353589Non coding
41. (TGAA)312354962354973Non coding
42. (TTAT)312361929361940Non coding
43. (AACC)312362302362313Non coding
44. (ATGA)312370172370183Non coding
45. (TCGG)312371183371194Non coding
46. (TAGC)312376124376135Non coding
47. (ATTT)312378838378849Non coding
48. (TCAA)312394590394601Non coding
49. (GTGA)312397547397558Non coding
50. (ACTG)312400011400022Non coding
51. (GCTA)312400871400882Non coding
Kumar M, Kapil A, Shanker A (2014). Mitochondrion, http:// dx.doi.org/10.1016/j.mito.2014.02.002                                                                                         Site best viewed at 1280x768.