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Organism:
Beta macrocarpa
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(NC_015994 , 385220 bp)
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Show Primer
Download
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Compound
:
0
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Perfect Compound
:
0
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Overlapping Compound
:
0
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Perfect
:
69
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Density of SSR
:
1SSR/
5.58
kb
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Average length of SSR
:
12.62
bp
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Coding
:
5
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Non-Coding
:
63
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Coding and Non-Coding
:
1
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| REPEAT | MONO | DI | TRI | TETRA | PENTA | HEXA | TOTAL |
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PERFECT
|
3
|
2
|
12
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42
|
8
|
2
|
69
|
|
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Perfect SSRs
| S. No. | MOTIF | LENGTH | START | END | REGION |
|
1.
| (CTC)4 | 12 | 27453 | 27464 | Non coding |
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2.
| (AAG)4 | 12 | 53079 | 53090 | Non coding |
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3.
| (AGA)4 | 12 | 63020 | 63031 | Non coding |
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4.
| (CTT)4 | 12 | 83849 | 83860 | Non coding |
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5.
| (AAT)4 | 12 | 107430 | 107441 | Non coding |
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6.
| (AAG)4 | 12 | 126269 | 126280 | Non coding |
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7.
| (GAA)4 | 12 | 205119 | 205130 | Non coding |
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8.
| (AAT)5 | 15 | 218792 | 218806 | Non coding |
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9.
| (TCT)4 | 12 | 219505 | 219516 | Non coding |
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10.
| (CTT)4 | 12 | 224966 | 224977 | Non coding |
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11.
| (TAG)5 | 15 | 319802 | 319816 | Coding |
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12.
| (TAG)4 | 12 | 377620 | 377631 | Non coding |
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Kumar M, Kapil A, Shanker A (2014). Mitochondrion, http://
dx.doi.org/10.1016/j.mito.2014.02.002
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