MitoSatPlant: Mitochondrial Microsatellites Database of Viridiplantae
 
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       Organism: Beta macrocarpa (NC_015994 385220 bp)                                                                                                     Show Primer       Download
Compound : 0     Perfect Compound : 0   Overlapping Compound : 0
Perfect      : 69     Density of SSR      : 1SSR/ 5.58 kb   Average length of SSR  : 12.62 bp
Coding      : 5     Non-Coding           : 63   Coding and Non-Coding : 1
REPEATMONODITRITETRAPENTAHEXATOTAL
PERFECT 3 2 12 42 8 2 69
IMPERFECT 14 50 148 213 36 12 473
Perfect SSRs
S. No.MOTIFLENGTHSTARTENDREGION
1. (CTTT)31255695580Non coding
2. (TCTG)3121228812299Non coding
3. (AAAC)3122282122832Non coding
4. (AAGT)3123793537946Non coding
5. (TCGC)3123862838639Non coding
6. (TTGA)3125037250383Non coding
7. (TTGT)3125130751318Non coding
8. (TTTC)3125445654467Non coding
9. (AAGT)3126052560536Non coding
10. (CTTC)3127617976190Non coding
11. (ATTC)3128353583546Non coding
12. (GCCG)3129436794378Non coding
13. (TCGA)312111473111484Non coding
14. (CTTG)312111831111842Non coding
15. (TAAG)312115530115541Non coding
16. (ACTT)312132027132038Non coding
17. (TCTG)312140526140537Non coding
18. (CTTT)312152336152347Coding
19. (CAAG)312165607165618Non coding
20. (CTTT)312182465182476Non coding
21. (TACG)312202711202722Non coding
22. (CGCC)312224891224902Non coding
23. (TTAG)312228210228221Non coding
24. (TCGG)312230172230183Non coding
25. (CATT)312234524234535Non coding
26. (AAAG)312235982235993Non coding
27. (CTTT)312236196236207Non coding
28. (AGAA)312243848243859Non coding
29. (CTTT)312255696255707Non coding
30. (TCTG)312262418262429Non coding
31. (CTTT)312274229274240Coding
32. (TTTC)312291103291114Non coding
33. (TAGA)312295504295515Non coding
34. (TCTT)312300923300934Non coding
35. (CGAT)312310875310886Coding
36. (GCAG)312318352318363Non coding
37. (AAAG)312338986338997Non coding
38. (AAGA)312376915376926Non coding
39. (TTCC)312379454379465Non coding
40. (TGAG)312383831383842Non coding
41. (ATGA)312383856383867Non coding
42. (AAGA)312384200384211Non coding
Kumar M, Kapil A, Shanker A (2014). Mitochondrion, http:// dx.doi.org/10.1016/j.mito.2014.02.002                                                                                         Site best viewed at 1280x768.