MitoSatPlant: Mitochondrial Microsatellites Database of Viridiplantae
 
HOME ABOUT DATABASE ADVANCED SEARCH TUTORIAL STATISTICS CONTACT
       Organism: Beta vulgaris subsp. vulgaris (NC_002511 368801 bp)                                                                                                     Show Primer       Download
Compound : 0     Perfect Compound : 0   Overlapping Compound : 0
Perfect      : 68     Density of SSR      : 1SSR/ 5.42 kb   Average length of SSR  : 12.59 bp
Coding      : 6     Non-Coding           : 61   Coding and Non-Coding : 1
REPEATMONODITRITETRAPENTAHEXATOTAL
PERFECT 5 2 11 41 7 2 68
IMPERFECT 16 50 149 217 42 10 484
Perfect SSRs
S. No.MOTIFLENGTHSTARTENDREGION
1. (A)131314011413Non coding
2. (TCTAT)31521362150Non coding
3. (T)121227602771Non coding
4. (CAAG)31231233134Non coding
5. (ATT)4121620616217Non coding
6. (AG)6122914129152Non coding
7. (A)12123964739658Non coding
8. (TGTGTA)3185142551442Non coding
9. (CTTT)3125377553786Non coding
10. (CTA)5157295872972Coding
11. (CTGC)3127441174422Non coding
12. (ATCG)3128188281893Coding
13. (AAGA)3129183291843Non coding
14. (ATCT)3129724697257Non coding
15. (AGAA)312101647101658Non coding
16. (AAAG)312118511118522Coding
17. (ACAG)312130540130551Non coding
18. (TTTC)312134960134971Non coding
19. (AAGT)312141011141022Non coding
20. (CATTT)315143123143137Non coding
21. (AGA)412143502143513Non coding
22. (CTTC)312156651156662Non coding
23. (ATTC)312163989164000Non coding
24. (CTT)412164303164314Non coding
25. (GCCG)312174819174830Non coding
26. (AAGAA)315179181179195Coding
27. (AAGA)312188213188224Non coding
28. (TAG)412188918188929Non coding
29. (TTCC)312190746190757Non coding
30. (TGAG)312195121195132Non coding
31. (ATGA)312195146195157Non coding
32. (AAGA)312195490195501Non coding
33. (ACTT)312202155202166Non coding
34. (TCATT)315204106204120Non coding
35. (TCTTG)315204439204453Non coding
36. (TCTG)312210652210663Non coding
37. (TA)612221275221286Non coding
38. (AAAC)312221398221409Non coding
39. (CTC)412226032226043Non coding
40. (AAGT)312236511236522Non coding
41. (TCGC)312237204237215Non coding
42. (CTAGT)315245886245900Coding-Non coding
43. (TTGA)312248945248956Non coding
44. (TTGT)312249880249891Non coding
45. (AAG)412251651251662Non coding
46. (ACTT)312254815254826Non coding
47. (CAAG)312258505258516Non coding
48. (TCGA)312258863258874Non coding
49. (TACACA)318261558261575Non coding
50. (CTTT)312266704266715Non coding
51. (GTCTG)315281082281096Non coding
52. (TACG)312286930286941Non coding
53. (T)1212289070289081Non coding
54. (GAA)412289336289347Non coding
55. (AAT)515303003303017Non coding
56. (TCT)412303716303727Non coding
57. (CGCC)312309099309110Non coding
58. (CTT)412309174309185Non coding
59. (T)1212312297312308Non coding
60. (TTAG)312312420312431Non coding
61. (TCGG)312314382314393Coding
62. (CATT)312318734318745Non coding
63. (AAAG)312320192320203Non coding
64. (CTTT)312320406320417Non coding
65. (AGAA)312328058328069Non coding
66. (CTTT)312339906339917Non coding
67. (TCTG)312346625346636Non coding
68. (CTTT)312358656358667Coding
Kumar M, Kapil A, Shanker A (2014). Mitochondrion, http:// dx.doi.org/10.1016/j.mito.2014.02.002                                                                                         Site best viewed at 1280x768.