MitoSatPlant: Mitochondrial Microsatellites Database of Viridiplantae
 
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       Organism: Boea hygrometrica (NC_016741 510519 bp)                                                                                               Show Alignment       Show Primer       Download
     
          Density of SSR      : 1SSR/ 0.86 kb   Average length of SSR  : 12.38 bp
Coding      : 27     Non-Coding           : 562   Coding and Non-Coding : 2
REPEATMONODITRITETRAPENTAHEXATOTAL
PERFECT 6 11 9 33 5 1 65
IMPERFECT 8 79 208 237 39 20 591
Imperfect SSRs
S. No.MOTIFLENGTHSTARTENDREGION
1. TA1111331143Non coding
2. CA1473157328Non coding
3. GA1278017812Non coding
4. AT111273912749Non coding
5. CT111732317333Non coding
6. AT152030920323Non coding
7. CT112092420934Non coding
8. TA122165521666Non coding
9. AT132425624268Non coding
10. CT113016930179Non coding
11. TC123885238863Non coding
12. GA124735747368Non coding
13. AT115003150041Non coding
14. TA115063650646Non coding
15. TG115641856428Non coding
16. GA165913659151Non coding
17. AG116151661526Non coding
18. AT146396263975Non coding
19. AG116530365313Non coding
20. TC117753577545Non coding
21. TC128135781368Non coding
22. GA118297182981Non coding
23. AG118660586615Non coding
24. AG118893988949Non coding
25. AG129101791028Non coding
26. GA119118191191Non coding
27. TC119363293642Non coding
28. AT11101137101147Non coding
29. TA14105283105296Non coding
30. AT15123357123371Non coding
31. GA14123636123649Non coding
32. TA11129453129463Coding
33. AG11143468143478Non coding
34. CT13153203153215Non coding
35. TA27156140156166Non coding
36. AT11170853170863Non coding
37. TA13173743173755Non coding
38. GA11204937204947Non coding
39. TA11212778212788Non coding
40. TG11220410220420Non coding
41. TC11257009257019Non coding
42. GA11257090257100Non coding
43. TA12258051258062Non coding
44. GT11260639260649Non coding
45. TC11261391261401Non coding
46. AG14265379265392Non coding
47. AG13299208299220Non coding
48. AT12309713309724Non coding
49. TA14310534310547Non coding
50. AT13311172311184Non coding
51. TA12313403313414Non coding
52. CA11320421320431Non coding
53. AG11321150321160Non coding
54. TA13329399329411Non coding
55. AT11332265332275Non coding
56. TA14335677335690Non coding
57. TG11342841342851Non coding
58. TG11344716344726Non coding
59. TA11356488356498Non coding
60. TA11369973369983Non coding
61. TA11381271381281Non coding
62. GA11384560384570Non coding
63. AG12385308385319Non coding
64. TC11389063389073Non coding
65. TC11397211397221Non coding
66. CT11406100406110Non coding
67. AC12416144416155Non coding
68. GA11416241416251Non coding
69. TC11430030430040Non coding
70. CT13457942457954Non coding
71. CT12464513464524Non coding
72. AG12466000466011Non coding
73. TA12473281473292Non coding
74. TA12477021477032Non coding
75. AC12482134482145Non coding
76. TA11485377485387Non coding
77. CT11491785491795Non coding
78. TA11495768495778Non coding
79. TC11508092508102Non coding
Kumar M, Kapil A, Shanker A (2014). Mitochondrion, http:// dx.doi.org/10.1016/j.mito.2014.02.002                                                                                         Site best viewed at 1280x768.