MitoSatPlant: Mitochondrial Microsatellites Database of Viridiplantae
 
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       Organism: Boea hygrometrica (NC_016741 510519 bp)                                                                                                     Show Primer       Download
Compound : 0     Perfect Compound : 0   Overlapping Compound : 0
Perfect      : 65     Density of SSR      : 1SSR/ 7.85 kb   Average length of SSR  : 12.38 bp
Coding      : 3     Non-Coding           : 61   Coding and Non-Coding : 1
REPEATMONODITRITETRAPENTAHEXATOTAL
PERFECT 6 11 9 33 5 1 65
IMPERFECT 8 79 208 237 39 20 591
Perfect SSRs
S. No.MOTIFLENGTHSTARTENDREGION
1. (TAAG)3121136511376Non coding
2. (CTTT)3121281712828Non coding
3. (TATT)3121421814229Non coding
4. (ATTC)3123329633307Non coding
5. (TTAT)3125426454275Coding
6. (GGAG)3126217662187Non coding
7. (GATG)3127316273173Non coding
8. (TGAA)3127686876879Non coding
9. (TCTT)3128126581276Non coding
10. (AAGA)3129692996940Non coding
11. (AGGA)3129896298973Non coding
12. (CGAT)312146303146314Non coding
13. (TTCT)312152954152965Non coding
14. (TATC)312160521160532Non coding
15. (CTAA)312164723164734Non coding
16. (CTTT)312177446177457Non coding
17. (TCTT)312179529179540Non coding
18. (ACTA)312203484203495Non coding
19. (TAGA)312206747206758Non coding
20. (GAAT)312241485241496Non coding
21. (AGGG)312249796249807Non coding
22. (AGGG)312260348260359Non coding
23. (CAAG)312296273296284Non coding
24. (CAAG)312312417312428Non coding
25. (TCTT)312318879318890Non coding
26. (TAGC)312373620373631Non coding
27. (TTTA)312381230381241Non coding
28. (AGGG)312396121396132Non coding
29. (TCAT)312404497404508Non coding
30. (TTTA)312435441435452Non coding
31. (CTTC)312470215470226Non coding
32. (GAAA)312491845491856Non coding
33. (TGAC)312506722506733Non coding
Kumar M, Kapil A, Shanker A (2014). Mitochondrion, http:// dx.doi.org/10.1016/j.mito.2014.02.002                                                                                         Site best viewed at 1280x768.