MitoSatPlant: Mitochondrial Microsatellites Database of Viridiplantae
 
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       Organism: Brassica oleracea (NC_016118 360271 bp)                                                                                                     Show Primer       Download
Compound : 0     Perfect Compound : 0   Overlapping Compound : 0
Perfect      : 46     Density of SSR      : 1SSR/ 7.83 kb   Average length of SSR  : 12.61 bp
Coding      : 8     Non-Coding           : 37   Coding and Non-Coding : 1
REPEATMONODITRITETRAPENTAHEXATOTAL
PERFECT 7 2 6 29 2 0 46
IMPERFECT 11 49 163 135 35 12 405
Perfect SSRs
S. No.MOTIFLENGTHSTARTENDREGION
1. (CGGC)312454465Coding
2. (TTCA)31241034114Non coding
3. (TTCT)31266836694Coding
4. (GTTC)3121814918160Non coding
5. (AAAC)3122878728798Non coding
6. (AAAC)3124365043661Non coding
7. (AAAT)3127288972900Coding
8. (AAGA)312103840103851Non coding
9. (AGTG)312106373106384Non coding
10. (TCAT)312110934110945Non coding
11. (TTCA)312126501126512Non coding
12. (CATT)312138179138190Coding
13. (TTCT)312149371149382Coding
14. (AAGA)312160807160818Non coding
15. (TTTA)312160960160971Non coding
16. (TTCA)312174135174146Non coding
17. (TTCT)312176715176726Non coding
18. (GTTC)312188181188192Non coding
19. (AAAC)312198819198830Non coding
20. (AAAC)312213682213693Non coding
21. (AAAT)312242921242932Non coding
22. (AAGA)312273872273883Non coding
23. (AGTG)312276405276416Non coding
24. (TCAT)312280966280977Non coding
25. (TTCA)312296533296544Non coding
26. (CATT)312308211308222Non coding
27. (TTTA)312323101323112Non coding
28. (TTTG)312343139343150Non coding
29. (GCCG)312348489348500Non coding
Kumar M, Kapil A, Shanker A (2014). Mitochondrion, http:// dx.doi.org/10.1016/j.mito.2014.02.002                                                                                         Site best viewed at 1280x768.