MitoSatPlant: Mitochondrial Microsatellites Database of Viridiplantae
 
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       Organism: Brassica rapa subsp. campestris (NC_016125 219747 bp)                                                                                                     Show Primer       Download
Compound : 0     Perfect Compound : 0   Overlapping Compound : 0
Perfect      : 29     Density of SSR      : 1SSR/ 7.58 kb   Average length of SSR  : 13.03 bp
Coding      : 6     Non-Coding           : 21   Coding and Non-Coding : 2
REPEATMONODITRITETRAPENTAHEXATOTAL
PERFECT 4 1 5 18 1 0 29
IMPERFECT 7 27 91 85 23 8 241
Perfect SSRs
S. No.MOTIFLENGTHSTARTENDREGION
1. (TTCT)31239563967Coding
2. (AAGA)3121539015401Non coding
3. (TTTA)3121554415555Non coding
4. (AAGA)3124109741108Non coding
5. (AGTG)3124363043641Non coding
6. (TCAT)3124819148202Non coding
7. (TTCA)3126375563766Non coding
8. (CATT)3127540275413Coding
9. (TTTA)3129029090301Non coding
10. (TTTG)312110329110340Non coding
11. (GTTC)312120081120092Non coding
12. (AAAC)312130716130727Non coding
13. (AAAC)312145580145591Non coding
14. (AAAT)312174551174562Coding
15. (AAGA)312196655196666Coding-Non coding
16. (AATG)312199234199245Non coding
17. (GCCG)312202884202895Coding
18. (AATG)416218905218920Non coding
Kumar M, Kapil A, Shanker A (2014). Mitochondrion, http:// dx.doi.org/10.1016/j.mito.2014.02.002                                                                                         Site best viewed at 1280x768.