MitoSatPlant: Mitochondrial Microsatellites Database of Viridiplantae
 
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       Organism: Buxbaumia aphylla (NC_024518 100725 bp)                                                                                               Show Alignment       Show Primer       Download
     
          Density of SSR      : 1SSR/ 0.83 kb   Average length of SSR  : 14.25 bp
Coding      : 33     Non-Coding           : 87   Coding and Non-Coding : 2
REPEATMONODITRITETRAPENTAHEXATOTAL
PERFECT 1 20 3 6 2 0 32
IMPERFECT 4 38 34 35 7 4 122
Imperfect SSRs
S. No.MOTIFLENGTHSTARTENDREGION
1. AT1211391150Non coding
2. AT5213941445Non coding
3. AG1166556665Non coding
4. AT161169411709Non coding
5. AT121354913560Non coding
6. AT441449214535Non coding
7. TA241528415307Non coding
8. GA111688616896Coding
9. TC131861618628Coding
10. AT122042620437Coding
11. AT252076420788Non coding
12. AT222501325034Non coding
13. TA182770527722Non coding
14. AT222935029371Non coding
15. TA113938139391Non coding
16. AT114159841608Non coding
17. AT144406044073Non coding
18. GC114652546535Non coding
19. GC115419354203Non coding
20. AT125687656887Non coding
21. AT235899659018Non coding
22. AT316068860718Non coding
23. AT166244162456Non coding
24. AT166257962594Non coding
25. TA127245372464Non coding
26. AT217318173201Non coding
27. AT227459174612Non coding
28. AT227509575116Non coding
29. AT387527175308Non coding
30. AT117931979329Coding
31. AT128023880249Non coding
32. GA148661186624Non coding
33. AT148712787140Non coding
34. AG128792387934Non coding
35. AT168873188746Non coding
36. GA119171891728Coding
37. AT189567495691Non coding
38. AT129746997480Non coding
Kumar M, Kapil A, Shanker A (2014). Mitochondrion, http:// dx.doi.org/10.1016/j.mito.2014.02.002                                                                                         Site best viewed at 1280x768.