MitoSatPlant: Mitochondrial Microsatellites Database of Viridiplantae
 
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       Organism: Buxbaumia aphylla (NC_024518 100725 bp)                                                                                               Show Alignment       Show Primer       Download
     
          Density of SSR      : 1SSR/ 0.83 kb   Average length of SSR  : 14.25 bp
Coding      : 33     Non-Coding           : 87   Coding and Non-Coding : 2
REPEATMONODITRITETRAPENTAHEXATOTAL
PERFECT 1 20 3 6 2 0 32
IMPERFECT 4 38 34 35 7 4 122
Imperfect SSRs
S. No.MOTIFLENGTHSTARTENDREGION
1. TAA1258065817Non coding
2. CTC1274417452Coding
3. TTA1589618975Non coding
4. ACA121201112022Non coding
5. TAG121501515026Coding
6. ATT111556215572Non coding
7. TTA121582515836Coding
8. GGT131785917871Coding
9. TAA132251522527Non coding
10. CAT112731227322Coding
11. ATA122739127402Coding
12. ATG123026030271Non coding
13. CAT113406634076Non coding
14. TTA123442034431Non coding
15. GCG113509635106Coding
16. ATA124252242533Non coding
17. GCA114667046680Non coding
18. AGA115096650976Non coding
19. TGA145123351246Non coding
20. CTC135996559977Non coding
21. GCA116288862898Non coding
22. TCT116722767237Non coding
23. TCG126753467545Non coding
24. CGC117184971859Non coding
25. ATT128076280773Non coding
26. ATT118169981709Non coding
27. TAC128310883119Non coding
28. ATG118640386413Non coding
29. ATT129110291113Coding
30. TTA129222892239Coding
31. AGA129584495855Coding
32. AAC129640396414Non coding
33. ACT119853998549Non coding
34. TCT11100647100657Non coding
Kumar M, Kapil A, Shanker A (2014). Mitochondrion, http:// dx.doi.org/10.1016/j.mito.2014.02.002                                                                                         Site best viewed at 1280x768.