MitoSatPlant: Mitochondrial Microsatellites Database of Viridiplantae
 
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       Organism: Buxbaumia aphylla (NC_024518 100725 bp)                                                                                               Show Alignment       Show Primer       Download
     
          Density of SSR      : 1SSR/ 0.83 kb   Average length of SSR  : 14.25 bp
Coding      : 33     Non-Coding           : 87   Coding and Non-Coding : 2
REPEATMONODITRITETRAPENTAHEXATOTAL
PERFECT 1 20 3 6 2 0 32
IMPERFECT 4 38 34 35 7 4 122
Imperfect SSRs
S. No.MOTIFLENGTHSTARTENDREGION
1. ATTA12533544Non coding
2. AATC12676687Non coding
3. AATT1620092024Non coding
4. CTAT1141114121Non coding
5. ATTT1155315541Non coding
6. TTAT1283408351Non coding
7. CGTA111073010740Coding
8. TTTC111099511005Coding
9. GTTC121377513786Coding
10. TTTA121599616007Coding
11. TTTC111659316603Coding
12. TTAT121927919290Coding
13. AATC122129321304Non coding
14. TTCC112198321993Non coding
15. ATCG112208222092Non coding
16. ATGT112518125191Non coding
17. AATT112998629996Non coding
18. AAAT124173841749Non coding
19. AATA114215442164Non coding
20. CTTG124719147202Coding
21. AATA125439054401Non coding
22. TTTG115562055630Coding
23. TTTA116188061890Coding
24. AGAA126483564846Non coding
25. ACAT117006470074Coding
26. GGAC117083270842Non coding
27. AAAT117150371513Non coding
28. TTGG127285272863Coding
29. TTGG127552875539Coding
30. AAAG118010080110Non coding
31. TTTA128172481735Coding-Non coding
32. TTAG128701787028Coding
33. TTCA119120691216Coding
34. TAAT129303593046Coding-Non coding
35. TTCG12100483100494Non coding
Kumar M, Kapil A, Shanker A (2014). Mitochondrion, http:// dx.doi.org/10.1016/j.mito.2014.02.002                                                                                         Site best viewed at 1280x768.