MitoSatPlant: Mitochondrial Microsatellites Database of Viridiplantae
 
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       Organism: Capsicum annuum (NC_024624 511530 bp)                                                                                                     Show Primer       Download
Compound : 0     Perfect Compound : 0   Overlapping Compound : 0
Perfect      : 86     Density of SSR      : 1SSR/ 5.95 kb   Average length of SSR  : 12.71 bp
Coding      : 13     Non-Coding           : 72   Coding and Non-Coding : 1
REPEATMONODITRITETRAPENTAHEXATOTAL
PERFECT 5 8 15 46 10 2 86
IMPERFECT 11 89 187 273 44 28 632
Perfect SSRs
S. No.MOTIFLENGTHSTARTENDREGION
1. (TCTCT)315105651105665Non coding
2. (TTCAT)315166969166983Non coding
3. (CAGCG)315180847180861Non coding
4. (CTTTT)315210180210194Coding
5. (CTTTT)315260677260691Coding
6. (CAAAC)315327606327620Non coding
7. (AAATA)315452080452094Non coding
8. (GAAAA)315458828458842Non coding
9. (CATAT)315464843464857Non coding
10. (GAAAG)315495571495585Non coding
Kumar M, Kapil A, Shanker A (2014). Mitochondrion, http:// dx.doi.org/10.1016/j.mito.2014.02.002                                                                                         Site best viewed at 1280x768.