MitoSatPlant: Mitochondrial Microsatellites Database of Viridiplantae
 
HOME ABOUT DATABASE ADVANCED SEARCH TUTORIAL STATISTICS CONTACT
       Organism: Capsicum annuum (NC_024624 511530 bp)                                                                                                     Show Primer       Download
Compound : 0     Perfect Compound : 0   Overlapping Compound : 0
Perfect      : 86     Density of SSR      : 1SSR/ 5.95 kb   Average length of SSR  : 12.71 bp
Coding      : 13     Non-Coding           : 72   Coding and Non-Coding : 1
REPEATMONODITRITETRAPENTAHEXATOTAL
PERFECT 5 8 15 46 10 2 86
IMPERFECT 11 89 187 273 44 28 632
Perfect SSRs
S. No.MOTIFLENGTHSTARTENDREGION
1. (TAA)41258035814Non coding
2. (TTA)4122059320604Non coding
3. (ATA)5153412834142Non coding
4. (AAT)5153504235056Non coding
5. (GAA)4124072240733Coding
6. (ATT)412120067120078Non coding
7. (CTT)412143210143221Non coding
8. (GAA)412238603238614Coding
9. (AGT)412294172294183Non coding
10. (TTA)412375687375698Non coding
11. (AGC)412385761385772Coding
12. (CTT)412388717388728Non coding
13. (TAG)412401426401437Non coding
14. (CTG)412420011420022Non coding
15. (TTA)515434122434136Non coding
Kumar M, Kapil A, Shanker A (2014). Mitochondrion, http:// dx.doi.org/10.1016/j.mito.2014.02.002                                                                                         Site best viewed at 1280x768.