MitoSatPlant: Mitochondrial Microsatellites Database of Viridiplantae
 
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       Organism: Carica papaya (NC_012116 476890 bp)                                                                                                     Show Primer       Download
Compound : 1     Perfect Compound : 0   Overlapping Compound : 1
Perfect      : 86     Density of SSR      : 1SSR/ 5.42 kb   Average length of SSR  : 12.78 bp
Coding      : 2     Non-Coding           : 84   Coding and Non-Coding : 1
REPEATMONODITRITETRAPENTAHEXATOTAL
PERFECT 5 13 14 46 7 1 86
IMPERFECT 17 72 212 246 40 24 611
Perfect SSRs
S. No.MOTIFLENGTHSTARTENDREGION
1. (CTAGT)3153706337077Coding-Non coding
2. (CTAGG)315113061113075Non coding
3. (TTATA)315114784114798Non coding
4. (GTAAT)315151097151111Non coding
5. (CTACA)315230861230875Non coding
6. (CTAGA)315443848443862Non coding
7. (GAAGC)315446624446638Non coding
Kumar M, Kapil A, Shanker A (2014). Mitochondrion, http:// dx.doi.org/10.1016/j.mito.2014.02.002                                                                                         Site best viewed at 1280x768.