MitoSatPlant: Mitochondrial Microsatellites Database of Viridiplantae
 
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       Organism: Carica papaya (NC_012116 476890 bp)                                                                                                     Show Primer       Download
Compound : 1     Perfect Compound : 0   Overlapping Compound : 1
Perfect      : 86     Density of SSR      : 1SSR/ 5.42 kb   Average length of SSR  : 12.78 bp
Coding      : 2     Non-Coding           : 84   Coding and Non-Coding : 1
REPEATMONODITRITETRAPENTAHEXATOTAL
PERFECT 5 13 14 46 7 1 86
IMPERFECT 17 72 212 246 40 24 611
Perfect SSRs
S. No.MOTIFLENGTHSTARTENDREGION
1. (ACA)41281998210Non coding
2. (CTT)4127102071031Non coding
3. (AAG)4128597685987Non coding
4. (AAG)412141846141857Non coding
5. (AAG)412145256145267Non coding
6. (TAT)515235369235383Non coding
7. (AAG)412279895279906Non coding
8. (GAA)412280056280067Non coding
9. (AAG)412287476287487Non coding
10. (CTT)412295957295968Non coding
11. (AAC)412351277351288Non coding
12. (CTT)412450706450717Coding
13. (GTA)412453470453481Non coding
14. (TCT)412464229464240Non coding
Kumar M, Kapil A, Shanker A (2014). Mitochondrion, http:// dx.doi.org/10.1016/j.mito.2014.02.002                                                                                         Site best viewed at 1280x768.