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Organism:
Chara vulgaris
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(NC_005255 , 67737 bp)
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Show Primer
Download
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Compound
:
1
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Perfect Compound
:
0
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Overlapping Compound
:
1
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Perfect
:
8
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Density of SSR
:
1SSR/
6.77
kb
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Average length of SSR
:
16.25
bp
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Coding
:
0
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Non-Coding
:
9
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Coding and Non-Coding
:
0
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REPEAT | MONO | DI | TRI | TETRA | PENTA | HEXA | TOTAL |
PERFECT
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0
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0
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0
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8
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0
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0
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8
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Perfect SSRs
S. No. | MOTIF | LENGTH | START | END | REGION |
1.
| (ATTG)3 | 12 | 3117 | 3128 | Non coding |
2.
| (ATAC)3 | 12 | 10174 | 10185 | Non coding |
3.
| (AAAT)3 | 12 | 10813 | 10824 | Non coding |
4.
| (AAAT)3 | 12 | 14272 | 14283 | Non coding |
5.
| (ATAG)3 | 12 | 27831 | 27842 | Non coding |
6.
| (GAAT)3 | 12 | 39163 | 39174 | Non coding |
7.
| (GAAG)5 | 20 | 44759 | 44778 | Non coding |
8.
| (ATTG)3 | 12 | 62885 | 62896 | Non coding |
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Kumar M, Kapil A, Shanker A (2014). Mitochondrion, http://
dx.doi.org/10.1016/j.mito.2014.02.002
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