| |
Organism:
Chara vulgaris
|
(NC_005255 , 67737 bp)
|
|
Show Primer
Download
|
|
Compound
:
1
|
Perfect Compound
:
0
|
Overlapping Compound
:
1
|
|
Perfect
:
8
|
Density of SSR
:
1SSR/
6.77
kb
|
Average length of SSR
:
16.25
bp
|
|
Coding
:
0
|
Non-Coding
:
9
|
Coding and Non-Coding
:
0
|
| REPEAT | MONO | DI | TRI | TETRA | PENTA | HEXA | TOTAL |
|
PERFECT
|
0
|
0
|
0
|
8
|
0
|
0
|
8
|
|
|
Perfect SSRs
| S. No. | MOTIF | LENGTH | START | END | REGION |
|
1.
| (ATTG)3 | 12 | 3117 | 3128 | Non coding |
|
2.
| (ATAC)3 | 12 | 10174 | 10185 | Non coding |
|
3.
| (AAAT)3 | 12 | 10813 | 10824 | Non coding |
|
4.
| (AAAT)3 | 12 | 14272 | 14283 | Non coding |
|
5.
| (ATAG)3 | 12 | 27831 | 27842 | Non coding |
|
6.
| (GAAT)3 | 12 | 39163 | 39174 | Non coding |
|
7.
| (GAAG)5 | 20 | 44759 | 44778 | Non coding |
|
8.
| (ATTG)3 | 12 | 62885 | 62896 | Non coding |
|
|
|
Kumar M, Kapil A, Shanker A (2014). Mitochondrion, http://
dx.doi.org/10.1016/j.mito.2014.02.002
Site best viewed at 1280x768.
|
|
|
|