MitoSatPlant: Mitochondrial Microsatellites Database of Viridiplantae
 
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       Organism: Chlorella sorokiniana (NC_024626 52528 bp)                                                                                               Show Alignment       Show Primer       Download
     
          Density of SSR      : 1SSR/ 0.66 kb   Average length of SSR  : 12.62 bp
Coding      : 32     Non-Coding           : 44   Coding and Non-Coding : 3
REPEATMONODITRITETRAPENTAHEXATOTAL
PERFECT 3 0 0 2 0 0 5
IMPERFECT 9 2 15 38 13 2 79
Imperfect SSRs
S. No.MOTIFLENGTHSTARTENDREGION
1. AATTA1524042418Non coding
2. TTTTA1548354849Non coding
3. ATTTG1454085421Coding
4. GCGTT151267912693Coding
5. AGAAA141348513498Non coding
6. AAGGA152437324387Non coding
7. TATTT162738727402Coding
8. AATTT142902629039Non coding
9. TTTCT143245632469Non coding
10. AAAAT143456434577Coding
11. ATAAA153572735741Coding
12. AAAAT153835838372Coding-Non coding
13. CAAAT144825048263Non coding
Kumar M, Kapil A, Shanker A (2014). Mitochondrion, http:// dx.doi.org/10.1016/j.mito.2014.02.002                                                                                         Site best viewed at 1280x768.