MitoSatPlant: Mitochondrial Microsatellites Database of Viridiplantae
 
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       Organism: Chlorella sorokiniana (NC_024626 52528 bp)                                                                                               Show Alignment       Show Primer       Download
     
          Density of SSR      : 1SSR/ 0.66 kb   Average length of SSR  : 12.62 bp
Coding      : 32     Non-Coding           : 44   Coding and Non-Coding : 3
REPEATMONODITRITETRAPENTAHEXATOTAL
PERFECT 3 0 0 2 0 0 5
IMPERFECT 9 2 15 38 13 2 79
Imperfect SSRs
S. No.MOTIFLENGTHSTARTENDREGION
1. ATTA12112Non coding
2. TAAA1123342344Non coding
3. TTTC1244994510Non coding
4. TTTA1255695580Non coding
5. AAAG1168416851Non coding
6. TTTC111116411174Coding
7. TTAA111321813228Non coding
8. TTTG121675316764Coding
9. TTTA121824918260Non coding
10. AAAT112170021710Non coding
11. TTAT122717327184Non coding
12. TAAC113020330213Coding
13. TTTG123060930620Non coding
14. GAAA113247332483Non coding
15. AGAA123258432595Non coding
16. TTAA123334933360Coding
17. CAAA113373033740Non coding
18. TAAA123562635637Coding
19. TTTG123585635867Non coding
20. GATT123612336134Non coding
21. ATTT113656836578Coding
22. TTTA123776737778Coding
23. TTTC113904839058Non coding
24. GTTT123944439455Non coding
25. GAAT113954839558Non coding
26. GCTT114057140581Coding
27. TCAA114127341283Non coding
28. ATTA164129241307Non coding
29. TTTA124134241353Non coding
30. AAGC114641446424Coding
31. AAAT114681946829Non coding
32. TATT164697546990Coding
33. CAAA124750747518Coding
34. AGAC134764447656Coding
35. CTAT124882148832Coding
36. TAGA115042250432Coding
37. TATT115096350973Coding
38. AAGA125223252243Non coding
Kumar M, Kapil A, Shanker A (2014). Mitochondrion, http:// dx.doi.org/10.1016/j.mito.2014.02.002                                                                                         Site best viewed at 1280x768.