MitoSatPlant: Mitochondrial Microsatellites Database of Viridiplantae
 
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       Organism: Chlorella variabilis (NC_025413 78500 bp)                                                                                                     Show Primer       Download
Compound : 0     Perfect Compound : 0   Overlapping Compound : 0
Perfect      : 26     Density of SSR      : 1SSR/ 3.02 kb   Average length of SSR  : 12.88 bp
Coding      : 5     Non-Coding           : 21   Coding and Non-Coding : 0
REPEATMONODITRITETRAPENTAHEXATOTAL
PERFECT 19 1 0 5 1 0 26
IMPERFECT 37 3 19 69 20 9 157
Perfect SSRs
S. No.MOTIFLENGTHSTARTENDREGION
1. (TA)9187289Non coding
2. (ATAA)31262086219Coding
3. (T)121269026913Coding
4. (A)15151605716071Non coding
5. (T)14142115221165Non coding
6. (T)13132490324915Non coding
7. (A)12122515525166Non coding
8. (A)12122662826639Non coding
9. (TATT)3123391833929Coding
10. (A)13133501235024Non coding
11. (ATTT)3123744437455Coding
12. (TTAA)3123900139012Non coding
13. (A)12124250342514Non coding
14. (T)12124387643887Non coding
15. (ATTTT)3154659746611Non coding
16. (T)12124953449545Non coding
17. (T)12124954749558Non coding
18. (A)12125244752458Non coding
19. (T)12125598555996Non coding
20. (T)15155713757151Non coding
21. (CAAA)3126139461405Coding
22. (A)14146336063373Non coding
23. (T)14146433464347Non coding
24. (A)12126576565776Non coding
25. (A)12126579365804Non coding
26. (A)12127387673887Non coding
Kumar M, Kapil A, Shanker A (2014). Mitochondrion, http:// dx.doi.org/10.1016/j.mito.2014.02.002                                                                                         Site best viewed at 1280x768.