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Organism:
Chlorotetraedron incus
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(NC_024757 , 38406 bp)
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Show Primer
Download
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Compound
:
0
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Perfect Compound
:
0
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Overlapping Compound
:
0
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Perfect
:
12
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Density of SSR
:
1SSR/
3.2
kb
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Average length of SSR
:
15.83
bp
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Coding
:
1
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Non-Coding
:
11
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Coding and Non-Coding
:
0
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REPEAT | MONO | DI | TRI | TETRA | PENTA | HEXA | TOTAL |
PERFECT
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2
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0
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4
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2
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4
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0
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12
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Perfect SSRs
S. No. | MOTIF | LENGTH | START | END | REGION |
1.
| (T)12 | 12 | 10743 | 10754 | Non coding |
2.
| (ACAAA)3 | 15 | 12882 | 12896 | Non coding |
3.
| (AAT)4 | 12 | 13211 | 13222 | Non coding |
4.
| (ATA)11 | 33 | 13316 | 13348 | Non coding |
5.
| (ATA)6 | 18 | 13351 | 13368 | Non coding |
6.
| (AAT)4 | 12 | 13385 | 13396 | Non coding |
7.
| (TTTA)4 | 16 | 13724 | 13739 | Non coding |
8.
| (T)15 | 15 | 14953 | 14967 | Non coding |
9.
| (AAAAC)3 | 15 | 18098 | 18112 | Non coding |
10.
| (TGTT)3 | 12 | 20863 | 20874 | Coding |
11.
| (TTTTA)3 | 15 | 32022 | 32036 | Non coding |
12.
| (AAAAC)3 | 15 | 32726 | 32740 | Non coding |
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Kumar M, Kapil A, Shanker A (2014). Mitochondrion, http://
dx.doi.org/10.1016/j.mito.2014.02.002
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