| |
Organism:
Chlorotetraedron incus
|
(NC_024757 , 38406 bp)
|
|
Show Primer
Download
|
|
Compound
:
0
|
Perfect Compound
:
0
|
Overlapping Compound
:
0
|
|
Perfect
:
12
|
Density of SSR
:
1SSR/
3.2
kb
|
Average length of SSR
:
15.83
bp
|
|
Coding
:
1
|
Non-Coding
:
11
|
Coding and Non-Coding
:
0
|
| REPEAT | MONO | DI | TRI | TETRA | PENTA | HEXA | TOTAL |
|
PERFECT
|
2
|
0
|
4
|
2
|
4
|
0
|
12
|
|
|
Perfect SSRs
| S. No. | MOTIF | LENGTH | START | END | REGION |
|
1.
| (T)12 | 12 | 10743 | 10754 | Non coding |
|
2.
| (ACAAA)3 | 15 | 12882 | 12896 | Non coding |
|
3.
| (AAT)4 | 12 | 13211 | 13222 | Non coding |
|
4.
| (ATA)11 | 33 | 13316 | 13348 | Non coding |
|
5.
| (ATA)6 | 18 | 13351 | 13368 | Non coding |
|
6.
| (AAT)4 | 12 | 13385 | 13396 | Non coding |
|
7.
| (TTTA)4 | 16 | 13724 | 13739 | Non coding |
|
8.
| (T)15 | 15 | 14953 | 14967 | Non coding |
|
9.
| (AAAAC)3 | 15 | 18098 | 18112 | Non coding |
|
10.
| (TGTT)3 | 12 | 20863 | 20874 | Coding |
|
11.
| (TTTTA)3 | 15 | 32022 | 32036 | Non coding |
|
12.
| (AAAAC)3 | 15 | 32726 | 32740 | Non coding |
|
|
|
Kumar M, Kapil A, Shanker A (2014). Mitochondrion, http://
dx.doi.org/10.1016/j.mito.2014.02.002
Site best viewed at 1280x768.
|
|
|
|