MitoSatPlant: Mitochondrial Microsatellites Database of Viridiplantae
 
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       Organism: Chlorotetraedron incus (NC_024757 38406 bp)                                                                                                     Show Primer       Download
Compound : 0     Perfect Compound : 0   Overlapping Compound : 0
Perfect      : 12     Density of SSR      : 1SSR/ 3.2 kb   Average length of SSR  : 15.83 bp
Coding      : 1     Non-Coding           : 11   Coding and Non-Coding : 0
REPEATMONODITRITETRAPENTAHEXATOTAL
PERFECT 2 0 4 2 4 0 12
IMPERFECT 2 2 11 40 8 6 69
Perfect SSRs
S. No.MOTIFLENGTHSTARTENDREGION
1. (T)12121074310754Non coding
2. (ACAAA)3151288212896Non coding
3. (AAT)4121321113222Non coding
4. (ATA)11331331613348Non coding
5. (ATA)6181335113368Non coding
6. (AAT)4121338513396Non coding
7. (TTTA)4161372413739Non coding
8. (T)15151495314967Non coding
9. (AAAAC)3151809818112Non coding
10. (TGTT)3122086320874Coding
11. (TTTTA)3153202232036Non coding
12. (AAAAC)3153272632740Non coding
Kumar M, Kapil A, Shanker A (2014). Mitochondrion, http:// dx.doi.org/10.1016/j.mito.2014.02.002                                                                                         Site best viewed at 1280x768.