MitoSatPlant: Mitochondrial Microsatellites Database of Viridiplantae
 
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       Organism: Climacium americanum (NC_024515 105048 bp)                                                                                                     Show Primer       Download
Compound : 0     Perfect Compound : 0   Overlapping Compound : 0
Perfect      : 30     Density of SSR      : 1SSR/ 3.5 kb   Average length of SSR  : 13.97 bp
Coding      : 3     Non-Coding           : 26   Coding and Non-Coding : 1
REPEATMONODITRITETRAPENTAHEXATOTAL
PERFECT 3 16 4 6 1 0 30
IMPERFECT 15 32 37 52 9 1 146
Perfect SSRs
S. No.MOTIFLENGTHSTARTENDREGION
1. (AT)612511522Non coding
2. (AT)612549560Non coding
3. (TTC)41224942505Non coding
4. (AT)7141133411347Non coding
5. (ATAG)3121143111442Non coding
6. (AT)6121484214853Non coding
7. (TTTA)3121565815669Coding
8. (A)12121673016741Coding
9. (AT)6122051320524Non coding
10. (TGGGG)3152431124325Non coding
11. (AT)10202668226701Non coding
12. (AT)7142854128554Non coding
13. (TA)6122914229153Non coding
14. (AATC)3123388533896Non coding
15. (GAA)5154091440928Non coding
16. (AAT)4124094540956Non coding
17. (AT)6124235042361Non coding
18. (TA)8164236342378Non coding
19. (A)12125295352964Non coding
20. (ATAA)3125463154642Non coding
21. (AT)6125539455405Non coding
22. (G)33335774557777Non coding
23. (AT)7145788557898Non coding
24. (GAA)4126593765948Non coding
25. (ATTT)3127178671797Coding
26. (CT)6127437974390Non coding
27. (AT)12247441474437Non coding
28. (TAGA)3129189391904Coding-Non coding
29. (TA)714100185100198Non coding
30. (AT)612104969104980Non coding
Kumar M, Kapil A, Shanker A (2014). Mitochondrion, http:// dx.doi.org/10.1016/j.mito.2014.02.002                                                                                         Site best viewed at 1280x768.